Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015859523.1_cds_XP_016514343.1_26805
CDS Infomation

[gene=LOC107831128] [db_xref=GeneID:107831128] [protein=patatin-like protein 2] [protein_id=XP_016514343.1] [location=complement(join(4561..4627,4930..5105,5376..5678,6190..6351,6490..6676,6790..6974,7080..7211))] [gbkey=CDS]
Sequence

ATGGAGAGAAAAACATCTCAAATCCAACCTCCAACTTACGGTGATTTAATCACTGTTCTT
AGCATTGATGGAGGTGGCATTCGAGGAATTATTCCAGCTACCATTCTCAGTTTTCTTGAA
GCTCAACTTCAGGAGTTAGACGGCAATGATGCGAGACTTGCAGATTATTTTGACGTGATT
GCTGGAACGAGCACTGGTGGTCTTGTGACGGCCATGTTAACTGCTCCTGACGAAAATGAT
CGTCCACTTTATGCAGCCAAAGATATTACCCCATTCTACTTAGAGCATTGTCCAAAGATC
TTTCCACAAAAGAAATGCGGTTTGTTTGCTCCAATTGGGAACATGGTGCAAGCTATAATA
GGACCAAAATACGATGGAAAATACCTGCATGAAGTCGTCAAGGAGAAGCTGAAAGATACT
CGTCTTAGCAATACGATTACTAACGTTGTCATTCCTACTTTTGATATCAAGAAATTGCAG
CCTACCATCTTCTCCACTTATGAGACGAAACGATCAGCATGTTATGATGCAAAACTCTCT
GATATTTGTATCAGTACATCAGCAGCTCCTACTTATCTTCCTGCTCATTATTTCAAAGTT
GAGGATGGCAAAGGCAATGTAAAAGAACATCATCTCATTGATGGTGGTGTTGCTGCAAAT
AATCCGGCTTTGATTGCAGTATCAGAAGTAAGCAAAGAAATATTGAAGGACAACCCAGAT
TTCTTCCCTATAAAACCAATGGATTACGGGCGTTTCCTTGTAATATCAATAGGGACAGGA
TCTGCAAAATGGGAACATAAATATAATGCATCAATGGCCGCCAAATGGGGTATTGTGGAT
TGGTTATTTCACAAAGGTTCCACACCACTAATCGAAGTGTTCACCCAATCAAGTGCTGAT
TTGGTTGATTACCATAATTCTGTTGTTTTCCAAGCTCTTCGCTGTGATGATAATTACCTT
CGAATTCAAGAGGATGAACTGAATGGAACAGAAGCCTCAGTTGATATAGCCACAAAGGAA
AATTTGGAAAGGCTAGTGGAAATAGGGCAAAATTTACTAAAGAAGCCACTTTCAAGGGTA
AATTTGGAGACGGGTTTGGCAGAACCAATTCCTAAAGGAGGAACTAATGAAGAAGCCCTT
AAAAGGTTTGCAAGGTTATTGGTGAATGAAAGAAGACTTCGCGAATCAAGATCGCCACTT
ATCAATAAATAA

Peptide Sequence

PEP ID

XP_016514343.1
PEP Infomation

PREDICTED: patatin-like protein 2 [Nicotiana tabacum]
Sequence

MERKTSQIQPPTYGDLITVLSIDGGGIRGIIPATILSFLEAQLQELDGNDARLADYFDVI
AGTSTGGLVTAMLTAPDENDRPLYAAKDITPFYLEHCPKIFPQKKCGLFAPIGNMVQAII
GPKYDGKYLHEVVKEKLKDTRLSNTITNVVIPTFDIKKLQPTIFSTYETKRSACYDAKLS
DICISTSAAPTYLPAHYFKVEDGKGNVKEHHLIDGGVAANNPALIAVSEVSKEILKDNPD
FFPIKPMDYGRFLVISIGTGSAKWEHKYNASMAAKWGIVDWLFHKGSTPLIEVFTQSSAD
LVDYHNSVVFQALRCDDNYLRIQEDELNGTEASVDIATKENLERLVEIGQNLLKKPLSRV
NLETGLAEPIPKGGTNEEALKRFARLLVNERRLRESRSPLINK

Transcript Sequence

Gene sequence data has not been registered.